Alison L. Gould

PhD, Ecology and Evolutionary Biology


Gould, AL and JB Henderson (2022) Highly contiguous genome assemblies of Photobacterium strains isolated from fish light organs using nanopore sequencing technology. bioRvix doi:10.1101/2022.10.10.511632

Gould, AL, JB Henderson and AW Lam (2022) Chromosome-level genome assembly of the bioluminescent cardinalfish Siphamia tubifer, an emerging model for symbiosis research. Genome Biology and Evolution 14(4) evac044

Gould, AL, A Gaisiner and A Fritts-Penniman (2021) Museum genomics illuminate the high specificity of a bioluminescent symbiosis for a genus of reef fish. Frontiers in Ecology and Evolution 9:630207

Gould, AL and PV Dunlap (2019) Shedding light on specificity: population genomic structure of a symbiosis between a coral reef fish and luminous bacterium.  Frontiers in Microbiology 10:2670

Gould, AL, V Zhang, L Lamberti, EW Jones, B Obadia, A Gavryushkin, JM Carlso, N Beerenwinkel, and WB Ludington. (2018) Microbiome interactions shape host fitness. PNAS.

Gould, AL and PV Dunlap (2017) Genomic analysis of a cardinalfish with larval homing potential  reveals genetic admixture in the Okinawa Islands. Molecular Ecology 26(15):3870-3882

Gould, AL, KE Dougan, ST Koenigbauer and PV Dunlap (2016) Life history of the symbiotically luminous cardinalfish Siphamia tubifer (Perciformes: Apogonidae). Journal of Fish Biology 89(2):1359-1377

Gould, AL, S Harii and PV Dunlap (2015) Cues from the reef: olfactory preferences of a symbiotically luminous cardinalfish. Coral Reefs 34(2):673-677

Gould, AL, S Harii and PV Dunlap (2014) Host preference, site fidelity and homing behavior of the symbiotically luminous cardinalfish, Siphamia tubifer (Perciformes: Apogonidae)Marine Biology 161(12):2897-2907

Kimmerer, WJ, T Ignoffo, A Slaughter and AL Gould (2014) Food-limited reproduction and growth of three copepod species in the low-salinity zone of the San Francisco Estuary. Journal of Plankton Research 0(0):1-14

Dunlap, PV, AL Gould, ML Wittenrich and M Nakamura (2012) Symbiosis initiation in the bacterially luminous sea urchin cardinalfish Siphamia versicolor (Perciformes: Apogonidae). Journal of Fish Biology 81(4):1340-1356

Urbanczyk, H, Y Ogura, TA Hendry, AL Gould, N Kiwaki, JT Atkinson, T Hayashi and PV Dunlap (2011) Genome sequence of Photobacterium mandapamensis strain svers. 1.1, the bioluminescent symbiont of the cardinal fish Siphamia versicolor. Journal of Bacteriology 193(12):3144-3145

Gould, AL and WJ Kimmerer (2010) Development, growth, and reproduction of the cyclopoid copepod Limnoithona tetraspina in upper San Francisco Estuary. Marine Ecology Progress Series 412:163-177 (Gould&Kimmerer2010_MEPS)

Kimmerer, WJ and AL Gould (2010) A Bayesian approach to estimating copepod development times from stage frequency data. Limnology and Oceanography Methods 8:118-126 (Kimmerer&Gould2010)